Healthcare San Diego · 2026 +5.0% YoY proj.

Medical Assistant Salary in San Diego

Biotech, defense, military, perfect weather premium. Here's how Medical Assistants in San Diego get paid in 2026.

$63,500
Median Medical Assistant salary in San Diego, Q1 2026.
Versus US median ($48,500): +31% · Versus California state ($65,500): -3%
Range: $48,300 (P25) → $82,600 (P75) → $104,900 (P90).
Pay distribution · 2026
P25
$48,300
MEDIAN
$63,500
P75
$82,600
P90
$104,900
By Tenure

Medical Assistant Salary by Experience in San Diego

How pay scales with career stage in the San Diego metro market.

ExperienceMedian 202625th %75th %
Entry (0–1 yr)$44,400$33,800$57,800
Junior (2–4 yrs)$55,200$42,000$71,800
Mid-Level (5–9 yrs)$63,500$48,300$82,600
Senior (10–14 yrs)$76,200$57,900$99,100
Veteran (15+ yrs)$86,300$65,600$112,300
Metro Comparison

Medical Assistant Pay in Other Top US Metros

Highest-paying metros for Medical Assistants — useful if you're weighing a relocation.

San Diego Pay Map

Highest-Paying Jobs in San Diego

Top occupations by median pay across the San Diego metro economy.

→ See full San Diego salary guide for all 100 jobs

FAQ

Medical Assistant Salary in San Diego: FAQ

What is the average Medical Assistant salary in San Diego?

The average Medical Assistant salary in the San Diego metro is $63,500 per year as of 2026, with a typical range of $48,300 to $82,600 (25th–75th percentile). Top earners (90th percentile) make $104,900 or more.

Does San Diego pay more than the rest of California?

Yes — San Diego pays -3% relative to the California state median for Medical Assistants. Major metros typically concentrate higher-paying employers and command a wage premium over rural and small-city areas in the same state.

How does San Diego compare to other US metros for Medical Assistant pay?

San Diego vs. national: +31%. That puts San Diego among the stronger US markets for Medical Assistants — though cost of living in San Diego is also typically elevated.

What experience level does $63,500 represent?

In San Diego, the median Medical Assistant salary of $63,500 typically corresponds to 5–9 years of experience (mid-level). Entry-level Medical Assistants in San Diego start around $44,400, while seniors (10+ years) reach $76,200 or more.

Personal Audit

Are you underpaid as a Medical Assistant in San Diego?

Metro medians are useful benchmarks — but your exact number depends on your experience, education, and the specific employer. Run the free calculator for a personalized read.

Get my personal salary report →